Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  144 bits (364), Expect = 7e-39
 Identities = 102/306 (33%), Positives = 157/306 (51%), Gaps = 25/306 (8%)

Query: 310 ERRPIKFHNELDTIAQS--LENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQ 367
           + R ++   E+  ++Q   L+    RL D   +    +ND + +   + ++        +
Sbjct: 220 DSRGVQARLEMSILSQEARLKTCLTRLQDTAEH----LNDQARQSNTLAHNSSSGLERQR 275

Query: 368 QELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTL 427
            E    EQVATA  Q++ T+ +V    Q      + A +L +   DI   + +  E +++
Sbjct: 276 VET---EQVATAVNQMAATTQEVASHVQRTADATQEANRLTSRGRDIAGETREAIERLSV 332

Query: 428 SIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADE 487
            + E+ Q + QL + SD I  V DVI  I+DQTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 333 VVGETGQTVTQLAKDSDEIGGVVDVIKGIADQTNLLALNAAIEAARAGEMGRGFAVVADE 392

Query: 488 VRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHE----TQVANRALIASFNL 543
           VR LA +T +ST  I  +I KLQ+ +  A Q M        E       A+ AL+     
Sbjct: 393 VRQLAQRTSESTGQIHALIAKLQQTATNAVQTMDAGHRQAEEGVARVMEADEALVG---- 448

Query: 544 ISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQEN--------LSAMERTKQ 595
           IS+ V  I+++ + ++ A  EQ  V E++++ + +I  L  +         L + E T+ 
Sbjct: 449 ISEAVAHITDMTTQIAAATEEQSSVAEEISRNISNISELADQTSGQAHSSALLSEELTRT 508

Query: 596 ANQNIS 601
           AN   S
Sbjct: 509 ANTQYS 514