Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  157 bits (396), Expect = 1e-42
 Identities = 107/344 (31%), Positives = 177/344 (51%), Gaps = 4/344 (1%)

Query: 274 FSCVMLIGLYWVLSKELSGVRQIREWI--LALSDGQIKERRPIKFHNELDTIAQSLENLQ 331
           F CV+++ +  ++   LS +R++   +  +A   G +K R  ++  +EL  +  +     
Sbjct: 202 FCCVLVLTVLPLVV--LSPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLGGAFNRFL 259

Query: 332 FRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVM 391
            +L  ++    R   ++      +      N      E   ++QV+TA TQ+S    +V 
Sbjct: 260 DKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSAAVHEVA 319

Query: 392 QQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTD 451
             A SA   A+ A     +  +++ S+ +    +   +  +   I  L + + +I +V +
Sbjct: 320 HNAVSASDAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSSIGAVLE 379

Query: 452 VINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQE 511
           VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST DIQ  I +LQ 
Sbjct: 380 VIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRIERLQS 439

Query: 512 QSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTED 571
               A Q M    S   ++      +    +  S  +  I+++ + ++ A  EQ  VTE+
Sbjct: 440 GVAKAVQAMQVGSSKARDSVERAAGVDEVLSGTSGSIQRINDMAAQIANACEEQSSVTEE 499

Query: 572 VAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFK 615
           +A+ + DIR L  E  S   ++ QA+Q +S L+ NL +    F+
Sbjct: 500 IARNISDIRDLSNEAASNSAQSMQASQQLSSLSRNLAELTGRFR 543