Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  159 bits (403), Expect = 3e-43
 Identities = 102/337 (30%), Positives = 180/337 (53%), Gaps = 7/337 (2%)

Query: 284 WVLSKELS-GVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSH 342
           W++++++   +R     +  ++ G + E   I+  +EL  + + ++ +   L +++    
Sbjct: 307 WLITRQIILPLRTTMADVERIASGDLSETAQIQRRDELGVLQRGIQQMGSTLRELIGGIR 366

Query: 343 RTMNDLSIKQTD---ITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAEL 399
             ++ +S    +   +T       N+ ++E    +QVATA  ++S T  +V + A+ A L
Sbjct: 367 DGVSQISAAAEELSAVTQQTSAGVNSQKEET---DQVATAMHEMSATVQEVARNAEQAAL 423

Query: 400 NAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQ 459
            A  A     E   ++     Q E +  ++  S + +  L+E SD I SV +VI  +++Q
Sbjct: 424 AATEADSEAREGDRVVTEVVTQIERMASAVVRSTEAMTALQEESDKIGSVMNVIRAVAEQ 483

Query: 460 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQV 519
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA +TQ+ST +I+G++  LQ  +Q    +
Sbjct: 484 TNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKSTEEIEGLVAALQNGTQQVASI 543

Query: 520 MTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDI 579
           M  +  L        R   AS   I+  V  I  +N  ++ AA EQ  V E++++ + ++
Sbjct: 544 MHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIAAAAEEQSAVAEEISRSVVNV 603

Query: 580 RYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           R + ++  +A E T  ++  ++ L   L   +S F++
Sbjct: 604 RDVSEQTAAASEETAASSTELARLGGQLQMMVSRFRL 640