Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  161 bits (407), Expect = 8e-44
 Identities = 113/370 (30%), Positives = 190/370 (51%), Gaps = 11/370 (2%)

Query: 252 DIQQIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWILALS-----DG 306
           D++Q    Y     LI    S    V++     +L + +  VR +R  + A++     + 
Sbjct: 181 DVEQEFWNYLTRFSLIGLLISAIMAVLVA----ILIRSI--VRPLRHTMAAMANIASGEA 234

Query: 307 QIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNS 366
            +     +  ++EL T+ +       +L  VV     T   L      ++         S
Sbjct: 235 DLTRTLDVSGNDELTTLGRDFNRFTQKLRTVVGQLFETAGALDQSSRSLSQLSGQAHEQS 294

Query: 367 QQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVT 426
           QQ++  +EQVATA  +++    +V + A+ A     +A+    +    I++S +Q + ++
Sbjct: 295 QQQMLQMEQVATAINEVTYAVQEVAKNAEHASSEVGSAENQAGQGQRNIETSLQQIDELS 354

Query: 427 LSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVAD 486
            +I ++  +I  L + +  I SV +VI +I++QTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 355 ATIGQAVDVIQSLADETTKIGSVLEVIGSIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 414

Query: 487 EVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISD 546
           EVR LA +TQQST +I G+I +LQ+ S  A  V+  +      T         S   I+ 
Sbjct: 415 EVRLLAQRTQQSTAEIHGMIERLQKNSGAAVNVIMESNRASQLTVEQASQAGESLGEIAQ 474

Query: 547 KVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTN 606
            +  +S +N+ +++A  +Q  V ED+ + +     L QE+  A E++ +A + + +L   
Sbjct: 475 ALRNLSGLNASIASATLQQSHVVEDINQNVTQAAGLAQESTLAAEQSSEAGKQLGELAGQ 534

Query: 607 LNDALSFFKI 616
           LN  LS F++
Sbjct: 535 LNRLLSQFRV 544