Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  151 bits (382), Expect = 6e-41
 Identities = 101/336 (30%), Positives = 174/336 (51%), Gaps = 5/336 (1%)

Query: 284 WVLSKELSGVRQIREWILA---LSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRN 340
           W+L K ++    I   +LA   ++ G +     I   +E   +  +++ +Q +L D ++ 
Sbjct: 208 WMLIKSIT--TPIATALLAAETIAQGNLTRPISIDGTDEAGRLLLAMKTMQDKLRDTLQG 265

Query: 341 SHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELN 400
              +   L+    ++    + +     Q+   IEQ ATA  Q++    +V + A S    
Sbjct: 266 ISGSATQLASAAEELNAVTDESARGLVQQNDEIEQAATAVNQMTSAVEEVARNATSTSQA 325

Query: 401 AETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQT 460
           + +A     +  D++  +    E ++  +  + ++I  L   S +I  V DVI  ++DQT
Sbjct: 326 SRSAATSAGDGRDLVQETVSAIERMSGDVQGTAELIISLANESRDIGKVLDVIRGLADQT 385

Query: 461 NLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVM 520
           NLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQQST +I+ +I  +Q  ++ A   M
Sbjct: 386 NLLALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMISSIQTGTEQAVSSM 445

Query: 521 TRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIR 580
             +      T    +    + N I+  V EI+  N ++++AA EQ  V  +V + + +IR
Sbjct: 446 RNSTERAESTLNIAKGAGQALNTINSAVEEINERNMVIASAAEEQAQVAREVDRNLVNIR 505

Query: 581 YLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
            L  ++ +   +T  A+  +S L  +LN  ++ F +
Sbjct: 506 DLSAQSTNGANQTSAASTELSRLAIDLNGMVARFAL 541