Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  166 bits (421), Expect = 2e-45
 Identities = 171/646 (26%), Positives = 291/646 (45%), Gaps = 64/646 (9%)

Query: 8   VFLLLACIITLAFTAF-FYHSKLSDQTKSISSLSSQQAQERLQSYQDSLDFYKKLNTSLS 66
           + L  + ++  AFT F FY+  L      +      Q +E L    +S     +   S  
Sbjct: 11  ILLAASLVVIAAFTLFTFYNDYLQRNALHV------QLKENLNQTSESTAGNIRNWLSGR 64

Query: 67  VAIANSLRDKAVEELNAIALRIQENHGFIG-----VTFASL-----DGTMFT---DIGTL 113
           + +  +L + A    +      QE +  +G      TF S+     DG+  T   D  + 
Sbjct: 65  ILLVENLAENASSPQSP-----QEQNRVLGQPTLIATFMSIYQGRSDGSFVTQPPDDMSA 119

Query: 114 DWNAKTLRRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVY----VGNDIVGSVALD 169
           D++ +T  R W+V  +  G    T   +D  T   V+T+ATP+     V   I G ++L+
Sbjct: 120 DYDPRT--RPWYVDALRAGKTILTEPYLDAVTKGLVVTLATPIKGDSGVSGVIGGDLSLE 177

Query: 170 IAGDQIAS--PNGSGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKP-----LFKNLVSGQ 222
           I    I+S   +G G   + D N  +     T  +L+ K L +  P     L ++L   +
Sbjct: 178 ILVKMISSLRMHGDGYAFLVDANGRILVHPDT--SLVMKTLAEVYPANTPRLSQDLSESE 235

Query: 223 Y------VTFSDADS----HWFAVSQTEIDGENKLFTIIDIQQIVQTYKRDIQLIIAGFS 272
           Y      +TF+  D     +W+     + D          I        R+  ++    +
Sbjct: 236 YAGKTQILTFAHVDGLPSVNWYVGVAMDKD----------IAYAALGEFRNSAIVATVIA 285

Query: 273 GFSCVMLIG-LYWVLSKELSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQ 331
               ++L+G L  VL + L+ + +    I A  +G + +R  I+  +E   +        
Sbjct: 286 VVLIILLLGMLLSVLLRPLNLMGRAMHDIAA-GEGDLTKRLVIESQDEFGHLGNGFNLFV 344

Query: 332 FRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVM 391
            R+ D +R    +   L+     +  +   +  NS Q+      VA A  +L   + ++ 
Sbjct: 345 ERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINELGAATQEIA 404

Query: 392 QQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTD 451
           Q A  A  ++  A+ L ++  D++  + +    ++  I  +   I  L   + NI  + D
Sbjct: 405 QNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTKTANIGQILD 464

Query: 452 VINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQE 511
           VI  IS QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ+S   +Q +I +LQ 
Sbjct: 465 VITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQVQEMIEQLQS 524

Query: 512 QSQLADQVMTRNVSLIHET-QVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTE 570
            ++ A  +M  +     ET  +AN+A +AS   +++++ EI  +N  V+ A  EQ  V E
Sbjct: 525 GAREAVSIMNDSQRESVETVGIANKA-VASLEHVTERIGEIDGMNQSVAAATEEQTAVVE 583

Query: 571 DVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
            +   + +I  L Q+ +  +  T +A  ++   +T L   +  F+I
Sbjct: 584 AINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI 629