Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  150 bits (378), Expect = 2e-40
 Identities = 109/359 (30%), Positives = 187/359 (52%), Gaps = 10/359 (2%)

Query: 262 RDIQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWILA--LSDGQIKERRPIKFHNE 319
           RDI +I   F   + +  IGL   L++ + G  Q R    A  +++G +     +   +E
Sbjct: 189 RDIVII---FVVIAALCTIGLALWLTRSIVGPLQ-RAVTAAEQVANGDLTHTIEVDGEDE 244

Query: 320 LDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATA 379
           +  + ++L  +Q  L + +R+   +   L+   T++    E +     Q+   I+Q ATA
Sbjct: 245 VTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQNAEIDQAATA 304

Query: 380 TTQLSCTSFDVMQQAQSAE--LNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIIN 437
             +++    +V + A S     N  +   L  ++  I    S QT  +T ++  +  ++ 
Sbjct: 305 INEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQT--LTDNVQATSTLVQ 362

Query: 438 QLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQ 497
            L   S +I  V DVI +I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQQ
Sbjct: 363 NLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRALAHRTQQ 422

Query: 498 STIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSI 557
           ST++I  ++  ++  S  A   M  + +    T    +    S + I+  + +IS  N +
Sbjct: 423 STLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQISERNLV 482

Query: 558 VSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           +++AA EQ  V+ +V + + +IR L  ++     +   ++  +S L  +LN  +S FK+
Sbjct: 483 IASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQVVSRFKV 541