Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  161 bits (408), Expect = 7e-44
 Identities = 98/343 (28%), Positives = 182/343 (53%), Gaps = 3/343 (0%)

Query: 277 VMLIGLYWVLSKELSGVRQIREWILA---LSDGQIKERRPIKFHNELDTIAQSLENLQFR 333
           V+L+G++  +       R +   ++A   ++DG +         +EL  +  +++++   
Sbjct: 300 VLLLGIFAAILITRQITRPLDSTVIAARRIADGDLTNDLSTTRQDELGLLQNTMQHMTVS 359

Query: 334 LLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQ 393
           L  ++      +  ++    +++   E  +    Q+   ++QVATA  Q++ T  +V Q 
Sbjct: 360 LRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMASTVQEVAQN 419

Query: 394 AQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVI 453
            + A   A  A    A    ++  ++++   +   + +  + + +L + SD I  V DVI
Sbjct: 420 TEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKIGGVIDVI 479

Query: 454 NNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQS 513
             +++QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +TQ ST +I+ +I  LQ+ +
Sbjct: 480 KAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALIKSLQDGT 539

Query: 514 QLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVA 573
             A ++M  +      T    R    S   I+  ++ I  ++  +S AA EQ  VT+++ 
Sbjct: 540 GAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQSAVTDEIN 599

Query: 574 KQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           + +  +R +  ++ +A E++  +   ++ L +NL D ++ F+I
Sbjct: 600 RSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFRI 642