Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  154 bits (390), Expect = 9e-42
 Identities = 98/367 (26%), Positives = 194/367 (52%), Gaps = 7/367 (1%)

Query: 255 QIVQTYKRDIQLIIAGFSGFSCVMLIGLY--WVLSKELSGVRQIREWILA---LSDGQIK 309
           Q++   K     ++   S    V+L+G++  ++++++++    +   ++A   ++DG + 
Sbjct: 317 QVISAKKEQQTAVVQLLSVALVVLLVGIFAAFLITRQITV--PLNSTVIAARRIADGDLT 374

Query: 310 ERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQE 369
                   +EL  +  +++++   L  ++      +  ++     ++   E  +     +
Sbjct: 375 HDSSTTRQDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQ 434

Query: 370 LGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSI 429
              ++QVATA  +++ T  +V +  + A   A+ A +  A    ++  ++++   +   +
Sbjct: 435 KNEVDQVATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEV 494

Query: 430 HESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVR 489
            +  + + +L E S  I SV DVI  +++QTNLLALNAAIEAARAGEQGRGFAVVADEVR
Sbjct: 495 QQLGEAMQRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR 554

Query: 490 SLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVL 549
           SLA +TQ ST +I+ +I  LQ+ +  A  +M  ++     T V  R    +   I+  + 
Sbjct: 555 SLAQRTQNSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIG 614

Query: 550 EISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLND 609
            I  ++  +S AA +Q  VTE++ + +  +R +  ++ SA E++  +   ++ L ++L  
Sbjct: 615 TIEQMSQQISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQS 674

Query: 610 ALSFFKI 616
            ++ FKI
Sbjct: 675 MVARFKI 681