Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  155 bits (391), Expect = 6e-42
 Identities = 110/350 (31%), Positives = 191/350 (54%), Gaps = 8/350 (2%)

Query: 272 SGFSCVMLIGLYWVLSKELSGVRQIREWILALSDGQIKERRPIKFH--NELDTIAQSLEN 329
           +G   +M++ L  ++   +  +R     + +++ G+    R ++ H  +E+  +      
Sbjct: 197 AGIVLIMVLLLVTIVRSIVRPLRAAVGAMASIASGESDLTRTLETHGNDEITELGTHFNA 256

Query: 330 LQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFD 389
              +L +VV     +   L    TD+    E   + S+Q+   ++ VATA  +++    D
Sbjct: 257 FVAKLRNVVGQLQHSAVALGQASTDLGSDAEQAQSRSEQQSQQMDLVATAVNEVTYGVQD 316

Query: 390 VMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSV 449
           V + A+ A      A+    +    ID+S +Q E ++ +I ++ Q++  L   S  I SV
Sbjct: 317 VAKNAEHAASEMRDAESQAQQGQINIDNSLRQIEHLSSTIGQAVQVMQSLASESTQIGSV 376

Query: 450 TDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKL 509
            +VI++I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ+ST +IQ +I +L
Sbjct: 377 LEVISSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKSTAEIQSMIERL 436

Query: 510 QEQSQLADQVM---TRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQK 566
           Q+ S  A +V+   +R+  L  E   AN+A   S   IS  +  ++++N+ +++A  +Q 
Sbjct: 437 QKHSDAAVKVIGDSSRSSQLTIEQ--ANQA-GQSLTSISQALRNLNSLNASIASATLQQT 493

Query: 567 IVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
            V +D+ + +     L Q    A E++  A+ ++  L+  LN  L  F++
Sbjct: 494 HVVDDINQNVTQAAQLSQSTALAAEQSTSASLHLRGLSEELNTLLKQFRV 543