Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  150 bits (378), Expect = 2e-40
 Identities = 97/349 (27%), Positives = 183/349 (52%), Gaps = 9/349 (2%)

Query: 273 GFSCVMLIGLYWVLSKEL-SGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQ 331
           G S ++ +   W++++ +   +++  E +  +++G    +  +  ++EL  +  S+    
Sbjct: 282 GLSALLGVLAAWLITRSIVHPLKETVEIVEVVAEGDFTYKTQVTRNDELGALQGSM---- 337

Query: 332 FRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGL----IEQVATATTQLSCTS 387
            R+   +R+    M D  ++       +   T  +   +       EQ+ATA  Q++ T+
Sbjct: 338 LRMTSGLRSLIGEMKDGIVQVASAAEQLSAVTEQTSAGVNAQKLETEQIATAMQQMTATT 397

Query: 388 FDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNIS 447
            +V + A  A   A+ A +L  +   ++D +  Q E +   ++ ++  +  LR  + +I 
Sbjct: 398 HEVSRNAAQAVNTAQIASQLAQKGGQVVDRTRSQIETLAREMNMTRTAMAALRGNTQSIG 457

Query: 448 SVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIIL 507
            V DVI  ++DQTNLLALNAAIEAARAGE GRGFAVVADEVR LAV+T+ ST +I  +I 
Sbjct: 458 GVLDVIKTVADQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAVRTRTSTDEIALLIN 517

Query: 508 KLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKI 567
           +LQ  +    QV+ +N++L   +   +         I+  V EI  +N  ++ A  +Q  
Sbjct: 518 ELQTSTDHMGQVLEQNLALTDSSVELSTQASEVLQSITASVHEIEVMNEQIAVATEQQSN 577

Query: 568 VTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           V E++ + + ++R +  +  +A E T  ++  ++ ++  L +  + FK+
Sbjct: 578 VGEEIGRGVTNVRDISDQTAAASEETATSSVELARVSARLQEMTNRFKV 626