Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 2e-41
 Identities = 105/363 (28%), Positives = 184/363 (50%), Gaps = 2/363 (0%)

Query: 255 QIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKEL-SGVRQIREWILALSDGQIKERRP 313
           Q  Q Y   + ++I G   F  ++ + L  +L+K + S +         ++   + +   
Sbjct: 178 QATQVYDSGLYIVI-GLIIFVALLTLCLATLLTKTITSPIGSALSVAERIASSDLTKEVE 236

Query: 314 IKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLI 373
           +   +E   +  +L  +Q  L   +     + + L+    ++T   E ++     +   +
Sbjct: 237 VSGTDEAGRLLSALATMQQNLRSTIMQIADSSSQLAAASEEMTAVTEQSSLGLVSQNDEV 296

Query: 374 EQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQ 433
            Q ATA T++S    +V + A+SA   +   Q       + +  + K  E ++ ++ ++ 
Sbjct: 297 NQAATAVTEMSAAVDEVARNAESASEESRKGQGYTEVGLERVSQTLKSIEKLSSNVRDTS 356

Query: 434 QIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAV 493
           + I  L   + NIS V +VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA 
Sbjct: 357 EQITGLSNRAQNISKVVEVIRAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAH 416

Query: 494 KTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISN 553
           +TQ ST +I+ +I  +Q  S  A + M  +  L  E+        +S + I+  +  I+ 
Sbjct: 417 RTQVSTQEIEQMIQAIQNDSDQAVKAMATSRELAAESLSVAGDASSSLDQIATAITGINE 476

Query: 554 INSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSF 613
            N +++TA+ EQ  V  +V + +  IR L  ++ +   +T  A   +S L  +LN  ++ 
Sbjct: 477 RNILIATASEEQAHVAREVDRNLVSIRELASQSSAGASQTASACNEMSKLAVSLNQLVNR 536

Query: 614 FKI 616
           FK+
Sbjct: 537 FKV 539