Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  160 bits (404), Expect = 2e-43
 Identities = 102/366 (27%), Positives = 188/366 (51%), Gaps = 6/366 (1%)

Query: 257 VQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSG---VRQIREWILA---LSDGQIKE 310
           +Q  +RD +   A  +  +C +L  +  +++  +      R +RE +     ++ G + +
Sbjct: 275 LQLDRRDQESAQARTTQITCTLLAIILGIIAAVIITRQITRPLRETLAVVDRIASGDLTQ 334

Query: 311 RRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQEL 370
              +   +EL  + Q ++ +   L +++     ++  ++    +++   E  +     + 
Sbjct: 335 TLAVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQK 394

Query: 371 GLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIH 430
              +QVATA  ++S T  +V + A+ A   A  A +   +   ++  +  Q E +   + 
Sbjct: 395 VETDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVG 454

Query: 431 ESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRS 490
            S   + +L + SD I  V DVI  +++QTNLLALNAAIEAARAGE GRGFAVVADEVR 
Sbjct: 455 RSVDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRG 514

Query: 491 LAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLE 550
           LA +TQQST++I+ ++  LQ  ++    +M  +  L   +   +R    S   I+  V  
Sbjct: 515 LAQRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSS 574

Query: 551 ISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDA 610
           I  +N  ++ AA EQ  V E++++ + ++R + ++  SA E T  ++  ++ L   L   
Sbjct: 575 IQAMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTM 634

Query: 611 LSFFKI 616
           +S F+I
Sbjct: 635 VSRFRI 640