Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  162 bits (411), Expect = 3e-44
 Identities = 103/356 (28%), Positives = 193/356 (54%), Gaps = 2/356 (0%)

Query: 262 RDIQLIIAGFSGFSCVMLIGLYWVLSKELSG-VRQIREWILALSDGQIKERRPIKFHNEL 320
           + +Q+IIA  +  + V+ I   WV++++++  +++  E +  ++ G +     +   +EL
Sbjct: 284 KSVQMIIAA-TALAMVLGILAAWVITRQITTPLQETLEVVERVASGDLSRNLNVDRKDEL 342

Query: 321 DTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATAT 380
             +  +++ +   L ++V      +  ++    +++   E  +     +    +QVATA 
Sbjct: 343 GKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAM 402

Query: 381 TQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLR 440
            +++ T  +V + A+ A   A  A +   +   +++ +  Q E +  ++  S + +  L+
Sbjct: 403 HEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALK 462

Query: 441 EFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTI 500
           + SD I SV DVI ++++QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ+ST 
Sbjct: 463 QESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTE 522

Query: 501 DIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVST 560
           +I+ +I +LQ  +Q A  VM  +  L   +    R    S   I+  V  I  +N  ++ 
Sbjct: 523 EIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAA 582

Query: 561 AANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           AA EQ    E++ + + ++R + ++  +A E T  ++  ++ L  +L   +S F +
Sbjct: 583 AAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSRFTV 638