Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 658 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 3e-41
 Identities = 104/396 (26%), Positives = 191/396 (48%), Gaps = 2/396 (0%)

Query: 221 GQYVTFSDADSHWFAVSQTEIDGENKLFTIIDIQQIVQ-TYKRDIQLIIAGFSGFSCVML 279
           G+   + D D ++++V Q    G   +   +  ++I + T+    QL I        + +
Sbjct: 264 GKAQFWDDGDDNYYSVGQPFAGGPWTVIASMPRKEISEVTWHVGTQLAIGSLLAM-LIAV 322

Query: 280 IGLYWVLSKELSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVR 339
           I   W+L  +L  + ++     AL  G +  R  +  ++E+  ++ S   +   L  +V 
Sbjct: 323 ISAIWLLRSKLRPLSELVRQADALGAGDLSVRLNVTSNDEIGQLSGSFNKMSEALSSMVS 382

Query: 340 NSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAEL 399
           +      ++S +   ++    G     +Q+ G I  +A A  + S TS ++     + E 
Sbjct: 383 HIRTAAQEVSTRANVLSGLSGGAFEGMEQQSGEITSMAGAVEEFSATSMNIADNMGNTER 442

Query: 400 NAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQ 459
            A+   +        ++ +S   + +  S+  + ++I+ L + S  I S+  VI +I+DQ
Sbjct: 443 LAQENAQQTRIGRTSMEEASSSLQQIATSLSSTAKVIDTLGQRSQEIGSIVGVITSIADQ 502

Query: 460 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQV 519
           TNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +T+++T +I G+I  +Q+++  A   
Sbjct: 503 TNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTREATDEISGMIASIQQETGNAIST 562

Query: 520 MTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDI 579
           M +  +L+ E    N  + ++   I ++     +  + ++TA  EQ      ++  ++ I
Sbjct: 563 MQQGNTLMQEGLSLNAKVASALAQIDEQSRSAGHQFAAITTATQEQSSTATMLSSNLQSI 622

Query: 580 RYLVQENLSAMERTKQANQNISDLTTNLNDALSFFK 615
                E    M       Q ++ L T L   +  F+
Sbjct: 623 AMANSEQRQVMSNLAITAQELNGLATELRHEVDRFR 658