Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  164 bits (414), Expect = 1e-44
 Identities = 117/401 (29%), Positives = 202/401 (50%), Gaps = 18/401 (4%)

Query: 218 LVSGQYVTFSDADSHWFAVSQTEIDGENKLFTIIDIQQIVQTYKRD-IQLIIAGFSGFSC 276
           +V+  Y+   D    W+ V+Q     E ++F ++D   +   +    I L     SGF  
Sbjct: 252 MVASSYLPSID----WYLVAQVP---EAEVFALLDEAALKILFSTLLIALAFVVLSGFVA 304

Query: 277 VMLIGLYWVLSKELSGV-RQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLL 335
             +       SK ++ V R  R+  +   +G +++R P++  +EL  +A    +   ++ 
Sbjct: 305 SSV-------SKPIAAVARMFRD--IGEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQ 355

Query: 336 DVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQ 395
           D V    +T   L     D++   +    +SQ +     QV TA  ++  T  ++   A 
Sbjct: 356 DSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAANAA 415

Query: 396 SAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINN 455
            A   A+ A +       ++  +      ++  + +  ++I  L   + +I S+ DVI  
Sbjct: 416 QAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVIRA 475

Query: 456 ISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQL 515
           IS+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T  ST ++Q +I KLQ +S  
Sbjct: 476 ISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSESAR 535

Query: 516 ADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQ 575
           A   M+++ S   E   A      + + ISD++  IS++N  V+ A  EQ  V ED+ + 
Sbjct: 536 AVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDINRN 595

Query: 576 MEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           + +I  + Q   +  +   +A+++++ L T L+  ++ FK+
Sbjct: 596 VTEINDITQRTAATAQAAARASKDLNALATRLDQLVARFKV 636