Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  147 bits (372), Expect = 1e-39
 Identities = 109/357 (30%), Positives = 194/357 (54%), Gaps = 13/357 (3%)

Query: 253 IQQIVQTYKRDIQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWI--LALSDGQIKE 310
           +Q +  +  R + L+  G +  + V+LI L+  +   ++ ++QI++ +  LA ++G + +
Sbjct: 344 MQAMAASLGRFVLLLGIGIAAVA-VILIALF--IRSVVAPIQQIQQRVSQLASAEGDLTQ 400

Query: 311 RRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNS-QQE 369
              +  H EL  +         +L  ++    +   + S  ++  T  I   T  S  ++
Sbjct: 401 SLKVDEHAELIALGNGFNAFIGKLHGLISELKKVATE-SRNESQATARIAEETKQSVNRQ 459

Query: 370 LGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSI 429
              IE V TA  ++S T+ +V   A+++E  A  +  + ++     DS ++   +V+   
Sbjct: 460 YSEIESVVTAVNEMSHTAHEV---AKASEQTASESAAMASQVKVSQDSLTQAVSLVSTMS 516

Query: 430 HESQQI---INQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVAD 486
            ES Q    + ++ E S NIS + +VI+ I+ QTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 517 KESLQAKIAVGKVAESSTNISKILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVAD 576

Query: 487 EVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISD 546
           EVRSLA KTQ ST DI  +I  L+++ + A  ++ + V L  +          + +++  
Sbjct: 577 EVRSLASKTQASTDDISRLIDALEQEVKGASGIIDKGVGLAEQAVAQTEQAFEALSVMVA 636

Query: 547 KVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDL 603
            + EISN  + ++TAA EQ  VTE+V++ +  I     E +    + ++++++++ L
Sbjct: 637 GINEISNQVTQIATAAEEQSAVTEEVSRNITGISDSAAELMDLAGKARESSESLAKL 693