Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  152 bits (383), Expect = 5e-41
 Identities = 105/338 (31%), Positives = 173/338 (51%), Gaps = 13/338 (3%)

Query: 284 WVLSKELSGVRQIREWILALSDGQIKERRPIKF----HNELDTIAQSLENLQFRLLDVVR 339
           WV    ++ V +IR+ +  + +   K    + F     +EL  IA+ L  +   L  +++
Sbjct: 208 WVNRGVMTPVTEIRQKLRQIRE---KSDMTVSFTVFRDDELGHIAKDLNGVVNHLKGILK 264

Query: 340 N---SHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQS 396
           N   +  T+ D + +  + T          Q E    EQ ATA  +++    +V Q + S
Sbjct: 265 NIAEAASTLGDSADELNEFTRQANDRMFKQQSET---EQTATAMNEMTAAVAEVAQSSNS 321

Query: 397 AELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNI 456
           A  +A  A +  A  + I+  S     ++   I  +  +I +L   S NI  V DVI +I
Sbjct: 322 AAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIGRVLDVIKSI 381

Query: 457 SDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLA 516
           ++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T +ST +I+ +I  LQ+  + A
Sbjct: 382 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIESLQQGVKSA 441

Query: 517 DQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQM 576
              M + ++ +     +  A  ++   I   V  I+ +N+ ++TAA+EQ  V E + + +
Sbjct: 442 VNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSCVAESINQSI 501

Query: 577 EDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFF 614
             I  + QE+  A     +A   ++ L  ++   +  F
Sbjct: 502 IAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTF 539