Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  173 bits (438), Expect = 2e-47
 Identities = 148/531 (27%), Positives = 249/531 (46%), Gaps = 31/531 (5%)

Query: 114 DWNAKTLRRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGN-DIVG----SVAL 168
           D N  T +R W+ + ++ G        +D   G    T+ TPVY  N  ++G     + +
Sbjct: 138 DPNYYTNKRPWWQEALDKGGLFVGDPAVDANDGSISATVKTPVYGANGQLLGIGGMDILI 197

Query: 169 DIAGDQIASP---NGSGM-FMMTDRNFNVFASDLTHSTLIGKDLTKEK-------PLFKN 217
           D  G  + +P    GSG  F+MT     V+      S   G  + K              
Sbjct: 198 DTIGKSLLAPIKYQGSGQAFLMTGDGKLVYFPGFNESFPPGSAIQKVDNNGSEGFTALGQ 257

Query: 218 LVSGQYVTFSDA--DSHWFAVSQTEIDGENKL----FTIIDIQQIVQTYKRDIQLIIAGF 271
           L+  Q   F+D         V+  E+ G+          +   ++++   RD     A  
Sbjct: 258 LMQRQSSGFTDVVYQGSPQRVAFVEVAGDYPKQKWHLAFMLPHEVIEAPVRDA-FWNACL 316

Query: 272 SGFSCVMLIGL-YWVLSKELSGVRQIREWI-----LALSDGQIKERRPIKFHNELDTIAQ 325
                ++L+G+  W+L   L   RQ+   +     +A  +G +  R  I+  +EL  +A 
Sbjct: 317 MSLGIILLVGVTVWLLLLPLR--RQLESLLGAMDNMASGEGDLSRRIDIQREDELGLMAD 374

Query: 326 SLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSC 385
           +      ++  ++R +     D+     +     +       ++   I+ VA A  +++ 
Sbjct: 375 AFNRFAAKVQQMLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDSVAAAAIEMAH 434

Query: 386 TSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDN 445
           TS ++   AQ     AETAQ    +   I+  ++   E ++  + E+  +I +LR  S+ 
Sbjct: 435 TSQEMAASAQRTADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAVIKELRGSSEK 494

Query: 446 ISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGI 505
           I  V  VI NI++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST +IQGI
Sbjct: 495 IGEVLSVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQGI 554

Query: 506 ILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQ 565
           I +LQ+ +  A+ VM   V+     Q+    +  S   I+D +  I    + ++ A  +Q
Sbjct: 555 IQRLQQSAMEAESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQTTEITVAIGQQ 614

Query: 566 KIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
            +V ++VA+ +E++R L  ++ SA +    + +    LT  L+  +S F++
Sbjct: 615 AVVADEVAQNVENVRGLSDDSHSASQELAVSLKAFEQLTHALSGNISQFRV 665