Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  171 bits (433), Expect = 8e-47
 Identities = 105/328 (32%), Positives = 178/328 (54%), Gaps = 2/328 (0%)

Query: 291 SGVRQIREWILALSDGQ--IKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDL 348
           S V Q+   I A+SDG+  ++ R      +EL  +A++   L  +L  ++         L
Sbjct: 219 SRVEQLDTMIAAISDGEGDLRGRLDDSGRDELSLLARTFNGLMMKLQQLIGTIKSDAVSL 278

Query: 349 SIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLI 408
             + T + +S + +   S ++   +EQ+ATA  QLS    +V   +Q+A  + E A  LI
Sbjct: 279 DARVTGLNHSAKESEKISTEQNANLEQIATAVHQLSHAVHEVASSSQNALSDTEHANNLI 338

Query: 409 AESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAA 468
            ES+ ++  S ++ + +   +  + ++I  L   S  I +V DVI  I++QTNLLALNAA
Sbjct: 339 KESNAVVGQSVERVQQLAGVVSHASEVIQNLASESKQIVTVLDVIRGIAEQTNLLALNAA 398

Query: 469 IEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIH 528
           IEAARAGEQGRGFAVVADEVR+LA +TQQST DIQ ++  L+     A   +      + 
Sbjct: 399 IEAARAGEQGRGFAVVADEVRTLASRTQQSTEDIQRMVAGLESGVSEAVSAIDSGTRQVD 458

Query: 529 ETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLS 588
               A+ ++  +   + + V    ++  +++TA  +Q  V ++V + +  +  L QE++ 
Sbjct: 459 SVVDASGSITKALAEVDEAVSRTKDLIYLIATATEQQSKVVDEVNQNISSLNLLSQESIG 518

Query: 589 AMERTKQANQNISDLTTNLNDALSFFKI 616
            + RT++A   I+ + T L+  +  F +
Sbjct: 519 VVRRTREAADEIAQIGTGLSGNVGRFLV 546