Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  151 bits (382), Expect = 8e-41
 Identities = 106/327 (32%), Positives = 175/327 (53%), Gaps = 8/327 (2%)

Query: 293 VRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQ 352
           V Q R   LA ++G + ++  ++ H EL  +   +       L ++    + +   S  +
Sbjct: 382 VIQSRVENLASAEGDLTQQVTVESHAELIALGGGINGF-INKLRLLIGELKELASRSQAE 440

Query: 353 TDITYSIEGNTNNS-QQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAES 411
           + +   I   T+NS  ++   IE V TA  ++S T+ +V   A+++E  A   + +    
Sbjct: 441 SQVAAEIAQQTHNSVNRQYSDIESVVTAVNEMSATALEV---AKASEQTASETEAMTLNV 497

Query: 412 HDIIDSSSKQTEMVTLSIHES---QQIINQLREFSDNISSVTDVINNISDQTNLLALNAA 468
               DS S+    VT    ES   ++ + ++ E S NIS + +VI+ I++QTNLLALNAA
Sbjct: 498 KAGEDSLSQAMGYVTHMSQESLLAKEAVGKVAESSTNISKILEVISAIAEQTNLLALNAA 557

Query: 469 IEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIH 528
           IEAARAGEQGRGFAVVADEVR+LA KTQ ST +I  +I  LQ +   A Q++ + V    
Sbjct: 558 IEAARAGEQGRGFAVVADEVRALASKTQSSTDEIGKLIEALQREVNSASQIIDQGVDGAQ 617

Query: 529 ETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLS 588
                  + ++S N I +++ E+S+  + ++TAA EQ  VTE+V++ +  I     E   
Sbjct: 618 RAVAQTESALSSLNTIVNQIQEVSSQVTHIATAAEEQSAVTEEVSRNITGISDSASELAR 677

Query: 589 AMERTKQANQNISDLTTNLNDALSFFK 615
             +  +Q++ +++ L    +  L   K
Sbjct: 678 LADEAQQSSASLAGLVEQQHQQLGKLK 704