Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  162 bits (410), Expect = 4e-44
 Identities = 131/468 (27%), Positives = 235/468 (50%), Gaps = 31/468 (6%)

Query: 160 NDIVGS--VALDIAGDQIASPNG--SGMFMMTDRNFNVFASDLTHSTLIGKD---LTKEK 212
           +DI+ +  +A D+A D+ A  N   S +  +T   FN     L+       +   L K  
Sbjct: 125 HDIIDNQILASDLADDERAEVNRLVSLLDKVTQEGFNPAIQALSQGEYKRSNQLLLEKIN 184

Query: 213 PLFKNLVSGQYVTFSDADSHWFAVSQTEIDGENKLFTIIDIQQIVQTYKRDIQLIIAGFS 272
           PLFK+ ++ Q   F D      A ++T              Q+ V  Y      ++A FS
Sbjct: 185 PLFKD-ITDQAQAFLDMQ---IAEAKTSYQAS---------QETVSLYI----WLVAIFS 227

Query: 273 GFSCVML-IGLYWVLSKELSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQ 331
           G + + + +   +++ +    V Q+ E  + ++ G + +R  +  H+E   IA+ +  + 
Sbjct: 228 GVAMLAISVSSVFIIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIA 287

Query: 332 FRLLDVVRNSHRTMNDLSIKQTD---ITYSIEGNTNNSQQELGLIEQVATATTQLSCTSF 388
                 V N+H + + L+    +   ++   + N  + QQ+  LI   ATA  + + T  
Sbjct: 288 SDFQQAVTNTHASTSRLASAAEENAVVSTQTQRNVLDQQQQTQLI---ATAIHEFTATVR 344

Query: 389 DVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISS 448
           +V Q A SA   ++ A      +  ++D S    E +   +  + + +  L + S+ I +
Sbjct: 345 EVAQSAASAATASQDANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGT 404

Query: 449 VTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILK 508
           V DVI  IS+QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA +TQ ST +IQ +I +
Sbjct: 405 VVDVIQAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQR 464

Query: 509 LQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIV 568
           LQ+ ++ + Q+M      +  +   +  +  +   I + + EI+ +N+ ++TA+ EQ  V
Sbjct: 465 LQQGARDSMQMMQSGTEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSV 524

Query: 569 TEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           TE++   + +I  +  +      ++  A ++++ L  ++   ++ +K+
Sbjct: 525 TEEININITNISEISDQTAEGARQSSDATEDLARLAESMEADIAHYKV 572