Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (394), Expect = 3e-42
 Identities = 104/321 (32%), Positives = 171/321 (53%), Gaps = 10/321 (3%)

Query: 301 LALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRN-SHRTMNDLSIKQTDITYSI 359
           +A  +G + +R  +K  +E+  + +S      +L  ++ + +H T      K      +I
Sbjct: 239 IAKGEGDLTKRLAVKGDDEIAQLGRSFNLFVDKLQTIIGDVAHATA-----KVKTAANAI 293

Query: 360 EGNTNNSQQEL----GLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDII 415
              T    ++L       +QV TA T++S T+ +V Q           A   +A +   +
Sbjct: 294 HDQTKVMSRQLISHNNETDQVVTAITEMSATASEVAQNTTQVAEATHAATGDVANAQRCV 353

Query: 416 DSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAG 475
           D+S ++   +   I+ +   I  L E S  I+SV  VI  I++QTNLLALNAAIEAARAG
Sbjct: 354 DASLEEISALMAQINNAASNIQSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAG 413

Query: 476 EQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANR 535
           EQGRGFAVVADEVR+LA +TQ ST++I  ++ +L +   LA + M  +      +  ++R
Sbjct: 414 EQGRGFAVVADEVRNLASRTQSSTLEINEMLSELHKLVSLAVKTMEESQQSCIRSVDSSR 473

Query: 536 ALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQ 595
           A+  S   ++  V  I+++++ ++TAA EQ  VTE++ + +  I+ +V E L + E    
Sbjct: 474 AISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVFAIQEIVNELLHSSEEAAS 533

Query: 596 ANQNISDLTTNLNDALSFFKI 616
            +Q +S    NL   +  FKI
Sbjct: 534 VSQTVSQEGLNLGKLVGQFKI 554