Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  156 bits (395), Expect = 2e-42
 Identities = 114/387 (29%), Positives = 203/387 (52%), Gaps = 30/387 (7%)

Query: 250 IIDIQQIVQTYKRD--------------IQLIIAGFSGFSCVMLIGLYWVLSKELSGVRQ 295
           I DI+ +V+ Y++               I L++ G + F  ++++  + ++    +    
Sbjct: 178 IDDIEAVVEDYRQTVTEQMADKSFMILLIALVLTGITAF--IIMVAAHRMVVPIKNMADS 235

Query: 296 IREWILALSDGQIKERRPIKFHNELDTIAQS----LENLQFRLLDVVRNSHRTMNDLSI- 350
           + +  +A  +G + +R  +K  +E+  + Q+    ++ LQ  + DV   + +  +  +  
Sbjct: 236 LND--IAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAI 293

Query: 351 -KQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIA 409
             QT +  S   + NN        +QV TA T++S T+ +V Q         + A   +A
Sbjct: 294 HDQTKVMSSQLLSHNNET------DQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVA 347

Query: 410 ESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAI 469
            +   +D+S ++   +   I+ +   I  L E S  I+SV  VI  I++QTNLLALNAAI
Sbjct: 348 NAQRCVDASLEEIAGLMSQINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAI 407

Query: 470 EAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHE 529
           EAARAGEQGRGFAVVADEVR+LA +TQ ST++I  ++ +L +   +A + M  +      
Sbjct: 408 EAARAGEQGRGFAVVADEVRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVR 467

Query: 530 TQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSA 589
           +  ++RA+  S   ++  V  I+++++ ++TAA EQ  VTE++ + +  I+ +V E L +
Sbjct: 468 SVDSSRAISESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHS 527

Query: 590 MERTKQANQNISDLTTNLNDALSFFKI 616
            E   + +Q +S    NL   +  FKI
Sbjct: 528 SEDAAKVSQTVSQEGINLGKLVGQFKI 554