Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  154 bits (388), Expect = 1e-41
 Identities = 106/318 (33%), Positives = 165/318 (51%), Gaps = 4/318 (1%)

Query: 301 LALSDGQIKERRPIKFHNELDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIE 360
           +A  DG +  R P++  +E+  +A +      ++   +   H T   L      +    +
Sbjct: 180 IANGDGDLSHRLPVESEDEIGKLANAFNGFVEQIHGTITRVHETSGLLLGDAKALGTLSQ 239

Query: 361 GNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSK 420
            N    Q +L   E   TA TQLS ++ +V   A+     A  A + + +     DS   
Sbjct: 240 SNNQRVQAQLKETEAAVTAVTQLSASANEVAINAKRTADAATQADRAVDDGQRQFDSGLA 299

Query: 421 QTEMVTLSIHESQQIINQLREFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRG 480
            T  +   +  S Q ++QL++ +  I  V  VI++I++QTNLLALNAAIEAARAGEQGRG
Sbjct: 300 ITRQLAGELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNLLALNAAIEAARAGEQGRG 359

Query: 481 FAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRA--LI 538
           FAVVADEVRSLA +TQQ+T +IQ +I   Q QS++A+ V     S     Q  NR+  + 
Sbjct: 360 FAVVADEVRSLASRTQQATGEIQKMI--QQVQSRVAETVNVMQSSQTLSNQGVNRSEEIK 417

Query: 539 ASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQ 598
              + ++D V  ISN+N  VS AA EQ  VTE +++ + D+  +        E   Q+++
Sbjct: 418 LVLSKVTDLVSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANVSGSASLDSEHLAQSSE 477

Query: 599 NISDLTTNLNDALSFFKI 616
            +      L   ++ F++
Sbjct: 478 RLFHQGERLRTLVTSFRL 495