Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 667 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  176 bits (445), Expect = 4e-48
 Identities = 145/536 (27%), Positives = 242/536 (45%), Gaps = 39/536 (7%)

Query: 114 DWNAKTLRRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGN-DIVGSVALDIAG 172
           D N  T +R W+ + ++          +D   G    T+ TPVY  N +++G   +DI  
Sbjct: 138 DPNYYTNKRPWWQEAIDQRGLFVGDPAVDANDGSISATVKTPVYGANGELIGIGGMDILI 197

Query: 173 DQIASP--------NGSGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYV 224
           D I           N    F+MTD    V+    +     G    +    FK+  SG   
Sbjct: 198 DTIGKTLLAPIKYRNYGQAFLMTDEGKLVYFPGFSDKFPPGSLANQIDSQFKD-TSGFTA 256

Query: 225 TFSDADSHWFAVSQTEIDGENKLFTIIDIQQIVQTYKRDIQLII---------------A 269
                       ++   +G  +  T + +       K  +  ++               A
Sbjct: 257 LRQQMQREAQGFAEVTFNGVPQRVTFVSVGGDYPKQKWHLAFMLPHEVIEAPVTEAFWNA 316

Query: 270 GFSGFSCVMLIGL-YWV--------LSKELSGVRQIREWILALSDGQIKERRPIKFHNEL 320
            F     ++L+G+  W+        LSK L  +  I E      D  + +R  ++  +EL
Sbjct: 317 CFVALGIMLLVGITVWLMLLPFRRQLSKLLDAMEDIAE-----GDSDLSQRILMEREDEL 371

Query: 321 DTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATAT 380
             +  +      ++  ++ ++     ++     D     +   ++   +   I+ VATA 
Sbjct: 372 GKLGDAFNRFAEKVQQMLLHTRNLTQEVGTGVMDARQVCDLAVSSVSSQKQQIDSVATAA 431

Query: 381 TQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLR 440
           TQ++ TS ++   AQ A   AE AQ    +   I+  +++  + +++ + E+ ++I +LR
Sbjct: 432 TQMAQTSQEMAISAQRANDFAEKAQTQAHDGTQIVSRATEGMKALSVQVIEAAKVIKELR 491

Query: 441 EFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTI 500
             S+ I  V  VI NI+DQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST 
Sbjct: 492 SSSEQIGEVLSVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTA 551

Query: 501 DIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVST 560
           +IQGII  LQ+ +  A+QVM   V      Q     +  + + I+  ++ I      ++ 
Sbjct: 552 NIQGIIQTLQQSALQAEQVMESGVEQARVGQDLTTQVEQALSDIASAIVSIQQQTVEITV 611

Query: 561 AANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           A  +Q +V E+VA+ +  +R L  ++L + +   Q+ Q     T  L   +  FKI
Sbjct: 612 AIGQQAVVAEEVAQNVVSVRGLSDQSLLSSQDLSQSLQGFEQATHELTRNIGQFKI 667