Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  171 bits (434), Expect = 7e-47
 Identities = 170/642 (26%), Positives = 286/642 (44%), Gaps = 47/642 (7%)

Query: 1   MIKKIISVFLLLACIITLAFTAFFYHSKLSDQTKSISSLSSQQAQERLQSYQDSLDFYKK 60
           +   + +V + +A +++++ + F  ++ L +    I  L++  A+      QD     K 
Sbjct: 10  LFSSLFAVLITVAVLVSIS-SYFIRNNALENTQHEIDQLANTFAEGIGLWMQDR----KM 64

Query: 61  LNTSLSVAIANSLRDKAVEELNAIALRIQENHGFIGVTFASLDGTMFTDIGTLDW-NAKT 119
             TSL   I     D +V+ +    L+     GF    F    G M+     L+  N   
Sbjct: 65  AITSLKKTIE---ADPSVQ-ITPYLLQAHNGMGFALTYFGDEQGNMYRQDPALNVANYDP 120

Query: 120 LRRDWFVKTVELGTKHYTAFDIDKTTGQHVLTIATPVYVGNDIVGSVALDIAGDQIASP- 178
             R W++          TA  +  T  + V+TIA PV V   + G  A ++  DQ+    
Sbjct: 121 RIRPWYMDAKAANAIVMTAPYVSATLKKQVVTIAEPVTVSGSLFGVAAANLTIDQLTDAV 180

Query: 179 -----NGSGMFMMTDRNFNVFASDLTHSTLIGKDLTKEKPLFKNLVSGQYVTFSDADSHW 233
                 G G  +M D+   + +     S L  + L K    F      Q    +      
Sbjct: 181 QRLQVPGKGYTIMVDKTGLIISHP--KSQLNNEQLNKIDNSFTPSWLSQRANAN------ 232

Query: 234 FAVSQTEIDGENKLFTIIDIQ----QIVQTYKRD------------IQLIIAGFSGFSCV 277
             + + E+DGE +L  +  +     ++V    +D            +  + AG      +
Sbjct: 233 -TLEERELDGETQLIYVAAVPSTDWELVFVMNKDEIMSQATTLAWWMSAVGAGLLVIFGL 291

Query: 278 MLIGLYWVLSKELSGVRQIREWILALSDGQIKER-RPIKFHNELDTIAQSLENLQFRLLD 336
           +L+ ++ +  K+L  V      I A  DG +  R      H+E+  +A        RL  
Sbjct: 292 VLVAIFKIQFKDLERVALALNDI-AEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHG 350

Query: 337 VVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVMQQAQS 396
           ++   H+    L  +    + S   N+     +   +  VATA T+++  + ++   A+ 
Sbjct: 351 MISRMHKIAGQLEYQAQGSSASATDNSQRIAVQQDEVTMVATAVTEMASATEEIASNAEH 410

Query: 397 AELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTDVINNI 456
               A+ A  L       +  S +    +   +  + +II++L E S  I+S+   I+ I
Sbjct: 411 TAQTAQDAVGLSNHGQKQVMQSQQSIRNLANEVETAGRIISELNEHSQKINSILLTISGI 470

Query: 457 SDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQEQSQLA 516
           ++QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ +T  ST +IQ +I  LQ+ +  A
Sbjct: 471 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKA 530

Query: 517 DQVMTRNVSLIHETQVAN-RALIASFNLISDKVLEISNINSIVSTAANEQKIVTEDVAKQ 575
            + MT++  +  ET VA+  +   S   IS  + EIS++ S ++TAA EQ  VT ++ + 
Sbjct: 531 VKSMTQSHDMA-ETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEINRN 589

Query: 576 MEDIRYLVQENLSAMERTKQAN-QNISDLTTNLNDALSFFKI 616
            E IR  V ENLS   ++     Q ++ L  +L   +  FK+
Sbjct: 590 TESIRE-VSENLSIEAQSSMVQAQELAHLAASLQQEVGRFKL 630