Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 566 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  161 bits (408), Expect = 6e-44
 Identities = 103/347 (29%), Positives = 182/347 (52%), Gaps = 3/347 (0%)

Query: 275 SCVMLIGLYWVLSKE---LSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQSLENLQ 331
           S  ++IGL+  L      +  + Q+R     +  G       +   +EL  +  S+  + 
Sbjct: 219 SIAVVIGLFVGLLSSRYIVQSITQLRNAASLMQSGNFSHELAVTSKDELGELTISMNQMA 278

Query: 332 FRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSCTSFDVM 391
             L   V        +++   T++    E N     ++    +QVA + TQ++ T  +V 
Sbjct: 279 LTLSKTVGQVVDRSEEIASMVTELNAVAENNREAILKQQDNTDQVAASMTQMAATITEVA 338

Query: 392 QQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDNISSVTD 451
             A++A  +A  A+    ES  ++++S K T+ + +S   S Q+I QL+  +  I +   
Sbjct: 339 CSAETASFSAGQAENRAKESCGVVEASEKITQQLVVSAQHSSQLIQQLQASTGKILNFVS 398

Query: 452 VINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGIILKLQE 511
           V++ I+ QTNLLALNA+IEAARAG+QGRGFAVVADEVR+LA ++Q +T +I  +I  L  
Sbjct: 399 VVDAIAGQTNLLALNASIEAARAGDQGRGFAVVADEVRALATRSQTATQEISELIQTLVV 458

Query: 512 QSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQKIVTED 571
            ++ A      N   I E+ V    +  +   I D + ++S  NS V+TA+ EQ +  ED
Sbjct: 459 DAKSAVSSFEENERQISESSVLVNQIKQNLFEILDALTQLSQANSQVATASEEQAVTAED 518

Query: 572 VAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKIEL 618
           +++++  IR   +  L++   T +A++++S    +L + +  FK+ +
Sbjct: 519 ISERINAIRDSGELVLNSAFETAKASESLSQQANSLREGMQQFKVRI 565