Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., Mobile element protein from Xanthomonas campestris pv. campestris strain 8004

 Score = 53.9 bits (128), Expect = 4e-12
 Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 18/249 (7%)

Query: 43  KQCGIAGLESQSRRPHSSPDTKLTDELRALILTM-RDKRNLGARRLQTELIRLHKIHLST 101
           + C +AGL   + R H+   T  T  L A ++ + +  R  G RRL  +L+R     ++ 
Sbjct: 11  RACRLAGLSRDAFR-HAPVPTPATQRLSARLVELAQTHRRFGYRRLH-DLLRPEFPSVNH 68

Query: 102 ATLHKVLSEASVKPIVTYRRKKDFQRYERP------IPGDRVQMD----TCKIAPGIYQY 151
             ++++  EA +K  V  RRK      ER       +P D   MD        A  I   
Sbjct: 69  KKIYRLYEEAELK--VRKRRKAKRPVGERQKLLASSMPNDTWSMDFVFDALANARRIKCL 126

Query: 152 TAIDDCSRYRV-LRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLM 210
           T +DD +R  V +      + A  V  +D       +P + ++TD G EF +        
Sbjct: 127 TVVDDFTRESVDIAVDHGISGAYVVRLLDQAACFRGYP-RAVRTDNGPEFTSRAFIAWTQ 185

Query: 211 IYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERP 270
            +GI+    +PG+P  N  +E      + E       +   Q  D++ A+W+ +YN  RP
Sbjct: 186 QHGIEHILIEPGAPTQNAYIESFNGKFRDECLNEHWFTSLAQARDVI-ADWRRHYNQIRP 244

Query: 271 HSSLNGLTP 279
           HSS   + P
Sbjct: 245 HSSCGRIPP 253