Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 390 a.a., transposase from Sinorhizobium meliloti 1021

 Score = 66.6 bits (161), Expect = 9e-16
 Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 21/291 (7%)

Query: 7   QRLQWVKM-YEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKL 65
           +R ++V++  EE  +   +CRR GIS     KW  R+ + G   L  +SRRPH SP  + 
Sbjct: 11  ERREFVRLALEEGVNRRELCRRFGISPDIGYKWLARW-EAGDRELADRSRRPHISP-MRC 68

Query: 66  TDELRALILTMRDKRNL-GARRLQTELIRLHKIHLSTATLHKVLSEASVKPIVTYRRKKD 124
            + +   +L +RD     GAR++   L R      + +T+H +L     + +        
Sbjct: 69  NEAVETEVLGVRDAHPAWGARKIVGYLERQGTHPPAVSTVHAILKRHD-RIVAPPGGAPA 127

Query: 125 FQRYERPIPGDRVQMD-----TCKIAPGIYQYTAIDDCSRY--RVLRCYSRRTAANTVDF 177
            QR+E+  P    QMD         A   +  T IDD SR+   ++ C  +R  A     
Sbjct: 128 LQRFEKEAPNQLWQMDFKGWVQLADATLCHPLTVIDDHSRFVPCLMACADQR-GATVRGH 186

Query: 178 IDCVVEEMPFPIQRIQTDRGREFFAEK------VQKQLMIYGIKFRPNKPGSPHLNGKVE 231
           ++        P   +  D G  +          +   L+  G+    ++P  P   GK E
Sbjct: 187 LERTFRRYGLP-DAMFVDNGAPWGDPSGEGWTGLGVWLLKLGVALLHSRPYHPQSRGKNE 245

Query: 232 RSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDR 282
           R  +T K+E +   D    L  +      W+  YN+ERPH +L+   P  R
Sbjct: 246 RFHRTLKAEVF-AFDRFRDLAAVQRAFDAWRELYNFERPHGALDHDVPASR 295