Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., ISSod2, transposase OrfB (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 43.5 bits (101), Expect = 6e-09
 Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 1/89 (1%)

Query: 192 IQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGL 251
           I+ D G EF + +  +    + I+    +PG P  N  +ER  KT +  +     +   L
Sbjct: 181 IRCDNGPEFISHEFTEWAKKHEIRIDYIQPGKPQQNAYIERHNKTIRYSWVSK-HLFDTL 239

Query: 252 QELDLLLAEWQHYYNWERPHSSLNGLTPI 280
           +E+     +W  +YN ERPH +  G  P+
Sbjct: 240 EEVQDYATKWLWFYNHERPHKANGGKPPL 268