Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., IS3 family transposase ISRaq1 from Enterobacter sp. TBS_079

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 63/242 (26%), Positives = 104/242 (42%), Gaps = 31/242 (12%)

Query: 54  SRRPHSSPDTKLTDELRALILTMRDKRNLGARRLQTELIRLHKIHLSTATLHKV--LSEA 111
           ++RP  + D  L+  +  L L   ++R  G RR   +L+R   +H++   ++++  L+  
Sbjct: 10  AQRP--AADAHLSGRITELAL---ERRRFGYRR-SWQLLRREGLHVNHKRVYRIYHLNGL 63

Query: 112 SVKPIVTYRRKKDFQRYERPI-----PGDRVQMDTCK--IAPG--IYQYTAIDDCSRYRV 162
           SVK     RR+K       P+     P     MD  K  +A G  I   T +DD ++   
Sbjct: 64  SVK---RRRRRKGLATERFPLLRPDAPNLIWSMDFVKDALANGRRIKCLTCVDDFTK--- 117

Query: 163 LRCYSRRTA-----ANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFR 217
             C +   A           +D +     +P   I+TD+G EF    + +    +G++ R
Sbjct: 118 -ECLTITAAFDISGVQVTRILDSIALFRGYPAT-IRTDQGPEFTCRALDQWAFEHGVELR 175

Query: 218 PNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGL 277
             +PG P  NG +E      + E       S  +      + +WQ  YN  RPHS+LN  
Sbjct: 176 LIQPGKPTQNGFIESFNGRFRDECLNEHWFS-DILHARKTINDWQQDYNECRPHSALNYQ 234

Query: 278 TP 279
           TP
Sbjct: 235 TP 236