Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 274 a.a., ISD1, transposase OrfB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 48.5 bits (114), Expect = 2e-10
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 151 YTAIDDCSRYRV-LRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQL 209
           +  +DD SR  + +   +   AA  +  +D +V     P  +++ D G E  +  +    
Sbjct: 129 FNVLDDFSRECLAIEVDTNLPAARVLRVLDRIVAWRGLPA-KLRMDNGPELISVLLADWA 187

Query: 210 MIYGIKFRPNKPGSPHLNGKVERSQKTDKSE---FYPTIDVSVGLQELDLLLAEWQHYYN 266
              G+     +PG P  N  +ER  KT + E   FY    +   L E+  +   W   YN
Sbjct: 188 EKNGVALEFIQPGKPTQNSYIERFNKTYREEVLDFY----LFKSLTEVKEITENWLRQYN 243

Query: 267 WERPHSSLNGLTPID 281
            ERPH SL  LTP +
Sbjct: 244 EERPHESLGDLTPAE 258