Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., transposase from Caulobacter crescentus NA1000

 Score = 51.2 bits (121), Expect = 3e-11
 Identities = 62/272 (22%), Positives = 106/272 (38%), Gaps = 27/272 (9%)

Query: 29  GISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMR-DKRNLGARRL 87
           G+ R T  +W   Y+  G   LE +  RP S    ++ +++RA IL M  +   L  R L
Sbjct: 30  GVPRATFYRWYDLYQTGGPEALEDRPARP-SRVWNRIPEDVRAAILEMALEHSELSPREL 88

Query: 88  QTELIRLHKIHLSTATLHKVLSEASV---KPIVTYRRKKDFQRYERPIPGDRVQMDTCKI 144
                      +S A+++++L    +      +  +  K F   +   P    Q D    
Sbjct: 89  AVRFTDSQGYFVSEASVYRLLKSHDLITSPAFIVMKAAKAFTD-KTTAPNQMWQTDFTYF 147

Query: 145 A----PGIYQYTAIDDCSRYRVL-RCYSRRTAANTVDFIDCV----------VEEMPFPI 189
                  +Y  T +DD SRY +  +  +   A +  D ++            V   P   
Sbjct: 148 KIIGWGWVYLSTILDDFSRYVIAWKLCTTMKAGDVTDTLELALSASGCDQVSVRHKP--- 204

Query: 190 QRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSV 249
            R+ +D G  + + ++   L    +K     P  P   GK+ER  +T K+          
Sbjct: 205 -RLLSDNGSSYISGELADWLGKQEMKHVRGAPYHPQTQGKIERWHQTLKNRILLENYFLP 263

Query: 250 GLQELDLLLAEWQHYYNWERPHSSLNGLTPID 281
           G  +L+  +  +  +YN  R H SL  +TP D
Sbjct: 264 G--DLEAQIGAFIEHYNHARYHESLENVTPAD 293