Pairwise Alignments

Query, 325 a.a., IS481 family transposase ISVch1 from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., transposase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 41.2 bits (95), Expect = 3e-08
 Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)

Query: 194 TDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSEFYPTIDVSVGLQE 253
           +DRG ++ +      L   GI     + G+P  N   ER     K+E    +  S  +QE
Sbjct: 186 SDRGVQYASADYIAILRHNGILPSMTEDGNPKDNAIAERVNGIIKNELLQGMRFS-SIQE 244

Query: 254 LDLLLAEWQHYYNWERPHSSLNGLTPI 280
           +   +A   H+YN ERPH SL+ LTP+
Sbjct: 245 VRKAVATAVHFYNNERPHMSLDMLTPV 271