Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 469 a.a., DEAD/DEAH box helicase-like from Synechococcus elongatus PCC 7942

 Score =  110 bits (276), Expect = 2e-28
 Identities = 98/348 (28%), Positives = 170/348 (48%), Gaps = 30/348 (8%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQT--QSTKVLFVAHREEILLQA 279
           Q + +  L  + A G    LV + TG GKT + ++ +LQ+  +  + L + HR+E+LLQA
Sbjct: 10  QQQVVEELRHSYATGHRSPLVAMPTGAGKTAVFSYISLQSAAKQKRTLILVHRKELLLQA 69

Query: 280 EKTFCQLIPNAKTGLYNGVTQNTQAMLLF----ASVATIGKQNHLQRFAADHFDY----I 331
            ++  +L      G+ +G+  +  + + +    ASV T+ ++        D  D+    I
Sbjct: 70  SRSLDRL------GVRHGLIASGFSWMPYPTQVASVQTLVRR-------LDRLDWEPELI 116

Query: 332 VVDEFHHAAA-RSYRNLLTYFKPKFLLGLTATPERSDQADILSLCDSNLVFERNLVHGID 390
           VVDE HH     ++  +L+ +    +LG+TATP R+D   +  + D +L+    +    +
Sbjct: 117 VVDEAHHVVPDNTWGKVLSAYPRSRVLGVTATPCRTDGRGLGDVFD-DLIIGPTIAELTE 175

Query: 391 EKILVPFDYHGIYDQAVNYQEIPWRNGKFDPDSLDNALATQRRAEHVYQHWHQK-KQTRT 449
              L P   +    QA +   +  R G +  D L  A+           H+ +       
Sbjct: 176 RGFLCPTKIYAPPIQA-DLTGVRMRAGDYAKDQLAQAMDKPVIVGDAIDHYRRLCPGVPA 234

Query: 450 LAFCVSKKHADFMAEFCLSKGIKAIAVYSD-SKVRRNQALQWLDSGKIDILFSVDLFNEG 508
           + FC S + A  +A    S G KA ++        R+  +  L SG+I +L S ++ +EG
Sbjct: 235 IGFCASVEIAQKVAVEFSSAGFKAASLDGTLDSATRSHLIDDLGSGRIQVLTSCEIVSEG 294

Query: 509 TDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN 556
           TD+P +   L+LRPT+S  L+LQQ+GR LR +    KS  +++D +GN
Sbjct: 295 TDIPVVTAALLLRPTQSLGLYLQQVGRVLRPA--PGKSHALILDHVGN 340