Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., DEAD/DEAH box helicase (NCBI) from Rhodospirillum rubrum S1H

 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 82/331 (24%), Positives = 124/331 (37%), Gaps = 66/331 (19%)

Query: 218 PNAVQVEALTALNATRAQGFSRGLVVLA-TGMGKT---------WLAAFDALQTQSTK-- 265
           P AVQ    TA+    AQG  R L+V A TG GKT          L   +A+   +T+  
Sbjct: 22  PTAVQ----TAVLEPGAQG--RDLLVSAQTGSGKTVAYGLAIASTLLGDEAVLEPATEPL 75

Query: 266 VLFVAHREEILLQAEKTFCQLIPNAKTGLYN---GVTQNTQAMLLFAS----VATIGK-Q 317
            L VA   E+ LQ  +    L  +A   + +   G+    +   L       V T G+ +
Sbjct: 76  ALIVAPTRELALQVHRELAWLYGHAGAKVVSCVGGMDPRAETRRLGEGCHIVVGTPGRLR 135

Query: 318 NHLQR--FAADHFDYIVVDEFHHAAARSYRNLLTYFKPKFLLGLTATPERSDQADILSLC 375
           +HL+R   A      +V+DE        +R  L +        L ATP+           
Sbjct: 136 DHLERGNLAVGRLKAVVLDEADEMLDLGFREDLEFL-------LEATPQER--------- 179

Query: 376 DSNLVFERNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWR-------NGKFDPDSLDNAL 428
              L+F   L   I                A  YQ   WR        G  D +    ++
Sbjct: 180 -RTLLFSATLPKAI-------------VTLAKRYQREAWRIAVAAGKQGHADIEYRAISV 225

Query: 429 ATQRRAEHVYQHWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSD-SKVRRNQA 487
           A       V       +   TL FC +++    +    L +G  A+A+  +  +  RNQA
Sbjct: 226 APNEVEHAVVNLLRYVESPATLVFCNTRESVRHLQAILLERGFAAVALSGELGQGERNQA 285

Query: 488 LQWLDSGKIDILFSVDLFNEGTDLPAIDTIL 518
           LQ L  G+  +  + D+   G DLP I  ++
Sbjct: 286 LQALRDGRARVCVATDVAARGIDLPNIGLVI 316