Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., Helicase associated domain protein from Parabacteroides merdae CL09T00C40

 Score = 72.4 bits (176), Expect = 1e-16
 Identities = 99/347 (28%), Positives = 150/347 (43%), Gaps = 53/347 (15%)

Query: 240 GLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEKTFCQLIPNAKTGLYNGVT 299
           G VV ATG GK++L A       + ++   A    IL + +K               G T
Sbjct: 129 GTVVQATGTGKSYLLARYISDHATERICVFAPNVTILEEIKKAV-------------GFT 175

Query: 300 QNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAARSY----RNLLTYFKPKF 355
                   F S+    K +  ++  ADH   I++DEFHH  A  +    + ++      +
Sbjct: 176 SPYICYRTFQSLIYYRKND--KQLKADH---ILIDEFHHFGAEIWGAALQEVIESNPQAY 230

Query: 356 LLGLTATPERSD-QADILSLC-DSNLVFERNLVHGIDEKIL-VPF---DYHGIYDQAVNY 409
           +LG +ATP R +   D + L  + NL +E  L      +IL VP      +G+  +    
Sbjct: 231 ILGTSATPIRPEGMIDTVDLYFEGNLFYELTLPQAWYYRILPVPILVQSAYGLDGELNRL 290

Query: 410 QEIPWRNG-----------KFDPDSLDNALATQRRAEHVYQHWHQKKQTRTLAFCVSKKH 458
           Q+   R+G           K D   +D   A    A  V + +  K   + L FC     
Sbjct: 291 QKRLDRSGCSIRRKEQVQKKLDVARVDFKGALG--APEVIRKFLPKDVCKLLVFCRDLTD 348

Query: 459 ADFMA-EFC--LSKGIKAIAVY----SDSKVRRNQALQWL--DSGKIDILFSVDLFNEGT 509
              M  E C  L++  + I  +    + S+   NQ L+    +SGK+ +LFSV++  EG 
Sbjct: 349 LKQMVPEVCGWLTQAGRVIIPFEIHHTQSERINNQILKAFQKESGKLHVLFSVNMLIEGL 408

Query: 510 DLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN 556
            +  ID +L LR TES I+ LQQLGR L      Q    VV+DF+ N
Sbjct: 409 HVEGIDAVLFLRRTESYIVTLQQLGRCLDAGSGKQP---VVLDFVNN 452