Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., DEAD/DEAH box helicase from Methanococcus maripaludis JJ

 Score = 44.3 bits (103), Expect = 3e-08
 Identities = 49/171 (28%), Positives = 78/171 (45%), Gaps = 16/171 (9%)

Query: 241 LVVLATGMGKTWLAAF---DALQTQSTKVLFVAHREEILLQAEKTFCQL--IPNAKTGLY 295
           L VL TG+GKT +AA      L  Q  KVL +A    ++ Q  K+  Q   I + K  + 
Sbjct: 32  LCVLGTGLGKTAIAALTIAGILSKQDGKVLIIAPSRPLVDQHFKSMNQFLNIDSEKIVIL 91

Query: 296 NG--VTQNTQAM----LLFASVATIGKQNHLQR-FAADHFDYIVVDEFHHAAA-RSYRNL 347
           NG    +  +AM     +F +   + + + + +      F  ++ DE HH     SY  +
Sbjct: 92  NGKISPKKREAMWESGKIFIATPQVAENDIISKILKPSQFSLLIADEAHHTTGNHSYTFV 151

Query: 348 LTYFKPK-FLLGLTATPERSDQADILSLCDSNLVFERNLVHGIDEKILVPF 397
              FK K  +LGLTA+P  S+   I  +C  NL  E   +   ++  + P+
Sbjct: 152 ANKFKKKSHVLGLTASP-GSNIDRIFEIC-GNLGIEHVEIKTEEDPDVAPY 200