Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 686 a.a., excinuclease ABC subunit B from Marinobacter adhaerens HP15

 Score = 46.6 bits (109), Expect = 6e-09
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 440 HWHQKKQTRTLAFCVSKKHADFMAEFCLSKGIKAIAVYSD-SKVRRNQALQWLDSGKIDI 498
           H   K + R L   ++K+ A+ + +F +   IK   ++SD   V R + ++ L  G+ D+
Sbjct: 449 HTRVKVKERVLVTTLTKRMAEDLTDFLMEHDIKVRYLHSDIDTVERVEIIRDLRRGEFDV 508

Query: 499 LFSVDLFNEGTDLPAIDTILMLRPTESKIL-----FLQQLGRGLR 538
           L  ++L  EG D+P +  + +L   +   L      +Q +GR  R
Sbjct: 509 LVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTMGRAAR 553



 Score = 26.2 bits (56), Expect = 0.008
 Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 215 PPAPNAVQVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREE 274
           P  P   Q +A+  L      G +   ++  TG GKT+  A + +Q      + +AH + 
Sbjct: 20  PFQPAGDQPKAIEGLMDGIQSGLAHQTLLGVTGSGKTFTIA-NVIQQVQRPTIIMAHNKT 78

Query: 275 ILLQAEKTFCQLIPN 289
           +  Q    F +  P+
Sbjct: 79  LAAQLYGEFKEFFPD 93