Pairwise Alignments

Query, 979 a.a., DEAD/DEAH box helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., ATP-dependent helicase from Klebsiella michiganensis M5al

 Score = 85.5 bits (210), Expect = 9e-21
 Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 31/363 (8%)

Query: 222 QVEALTALNATRAQGFSRGLVVLATGMGKTWLAAFDALQTQSTKVLFVAHREEILLQAEK 281
           Q EA+ A  A   +      +VL TG GK+ + A +  +    +VL +AH +E++ Q   
Sbjct: 9   QKEAVDATLAWFRRHHEPAAIVLPTGAGKSLVIA-ELARLARGRVLVLAHVKELVAQNHA 67

Query: 282 TFCQLIPNAKTGLYNGVTQNTQAMLLFASVATIGKQNHLQRFAADHFDYIVVDEFHHAAA 341
            +C L   A         + +   ++F SV ++ +  +L +F  + F  ++VDE H  + 
Sbjct: 68  KYCALGLEADIFAAGLKRKESHGKVVFGSVQSVAR--NLDQFQGE-FSLLIVDECHRISD 124

Query: 342 ---RSYRNLLTYFK---PKF-LLGLTATPERSDQADILSLC-------DSNLVF-----E 382
                Y+ ++++ +   P   LLGLTATP R  +  I           D N +F     E
Sbjct: 125 DDDSQYQQIISHLQQVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDENALFRDCIYE 184

Query: 383 RNLVHGIDEKILVPFDYHGIYDQAVNYQEIPWR-NGKFDPDSLDNALATQRRAE-HVYQH 440
             L + I    L P +   +     ++  +  + NG F    L++ L  Q+R   H+   
Sbjct: 185 LPLRYMIKNGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNHELKKQQRVTPHIVSQ 244

Query: 441 WHQKKQTR--TLAFCVSKKHADFMAEFCLSKGIKAIAVYSDSKVRRNQALQWLDSGKIDI 498
             +  QTR   + F  + +HA  +    L +G  A+         R++ ++   + +   
Sbjct: 245 IVEFAQTRKGVMIFAATVEHAREVTGL-LPQGEAALITGETPGPERDRIIEAFKAQQYRY 303

Query: 499 LFSVDLFNEGTDLPAIDTILMLRPTESKILFLQQLGRGLRRSIETQKSKLVVIDFIGN-H 557
           L +V +   G D P +D I +LRPTES  L+ Q +GRGLR  +   K+  +++D+ GN H
Sbjct: 304 LVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLR--LAPGKTDCLILDYAGNPH 361

Query: 558 DSF 560
           D +
Sbjct: 362 DLY 364