Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 252 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score = 65.9 bits (159), Expect = 8e-16
 Identities = 46/148 (31%), Positives = 70/148 (47%), Gaps = 5/148 (3%)

Query: 115 LMIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQVD 174
           L++ LDGV+DP NLG  +R AD  G   +I  +D +    P       G+   + +  V 
Sbjct: 97  LLLVLDGVTDPHNLGACLRSADAAGALAVIVPKDKSATLTPAVRKVACGAAEVIPLVAVT 156

Query: 175 ----LPDYLAKANLPVYGAFLEG-VSVHQTAFQAEGILLMGSESHGIREQAAQYVTDKIT 229
                 + L +  L V G   E  VS++        IL+MG+E  G+R    ++    + 
Sbjct: 157 NLARTLEKLQQRGLWVVGTAGEAEVSIYDQDLTGPTILIMGAEGKGMRRLTREHCDYLVK 216

Query: 230 IPAFGGAESLNVAMATGIILDNIRRQHS 257
           +P  G   SLNV++ATG+ L    RQ S
Sbjct: 217 LPMAGSVSSLNVSVATGVCLFEALRQRS 244