Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., rRNA methylases from Pseudomonas stutzeri RCH2

 Score = 90.1 bits (222), Expect = 4e-23
 Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 10/240 (4%)

Query: 23  IRALGQKKQRKAHGLFLVQGEKNVLELTNSTLKVQHIFATAEFLA---EHAQALAGFECI 79
           I+ L QKK R   G FLV+GE   LEL  + L    +  +  ++    EH Q+   F+  
Sbjct: 6   IKKLHQKKYRAEFGHFLVEGEHLALELQKAALHNPQLARSELYVTNAYEHWQS--PFKTH 63

Query: 80  EATLDDLTKVSTLVSNNAAIAVVAIP----HIEVPKAQGLMIALDGVSDPGNLGTIIRVA 135
             +   + +++   +    +A+V +P     +  P A    I L  + DPGNLGTI+R  
Sbjct: 64  LISDRQMAQIADTKTPQGIVALVPMPATGASLAAPVAGERAIYLHEIQDPGNLGTILRTL 123

Query: 136 DWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQVDLPDYLAKANLPVYGAFLEGVS 195
            W+G    + S    DPYNPK + ++MG+     +      D L      +    + G  
Sbjct: 124 AWFGNFRCLLSPGSVDPYNPKVVRSSMGAIFHAPMELDVELDSLRTRFERIACLDMHGEP 183

Query: 196 VHQTAFQAEGILLMGSESHGI-REQAAQYVTDKITIPAFGGAESLNVAMATGIILDNIRR 254
           V    F+A    L G+E+ G+ R+Q         TIP  G  ESLN+A    +    + R
Sbjct: 184 VRSAGFRAFDCYLFGNEARGVPRDQLNALDAQPFTIPGCGAIESLNLAATVNMCAYELSR 243