Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 248 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Acidovorax sp. GW101-3H11

 Score = 66.6 bits (161), Expect = 5e-16
 Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 5/150 (3%)

Query: 113 QGLMIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQ 172
           Q L++ LDGV+DP NLG  +RVAD  G   +IA +D A   N        G+   +    
Sbjct: 99  QPLLLVLDGVTDPHNLGACLRVADGAGAHAVIAPKDHAVGINATVAKVASGAAETMPYFM 158

Query: 173 VD----LPDYLAKANLPVYGAFLEG-VSVHQTAFQAEGILLMGSESHGIREQAAQYVTDK 227
           V       + L + N+   G   +   +++Q   +    L++G+E  G+R+   +   + 
Sbjct: 159 VTNLARTLNELKERNIWCIGTSDDAPKTIYQVDLKGPVALVLGAEGDGMRQLTRKTCDEL 218

Query: 228 ITIPAFGGAESLNVAMATGIILDNIRRQHS 257
           ++IP  G  ESLNV++A+G+ L    RQ +
Sbjct: 219 VSIPMKGAVESLNVSVASGVCLYEALRQRT 248