Pairwise Alignments

Query, 257 a.a., RNA methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., RNA methyltransferase, TrmH family, group 3 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 59.7 bits (143), Expect = 6e-14
 Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 11/148 (7%)

Query: 116 MIALDGVSDPGNLGTIIRVADWYGISHIIASQDCADPYNPKTISATMGSFGRVQVSQVDL 175
           ++ LDGV+DP NLG  +R AD  G+  II  +D +            G+   V + QV  
Sbjct: 99  LLILDGVTDPHNLGACLRNADAAGVQGIIVPKDNSVGLTAVVSKVACGAAETVPLFQVT- 157

Query: 176 PDYLAKA--NLPVYGAFLEGVS------VHQTAFQAEGILLMGSESHGIREQAAQYVTDK 227
              LA+   +L   G ++ G +      ++Q   +    + MG+E  G+R  + +     
Sbjct: 158 --NLARTMRHLQEKGVWIVGTAGEADCELYQADLKGPLAIAMGAEGKGLRRLSRECCDTL 215

Query: 228 ITIPAFGGAESLNVAMATGIILDNIRRQ 255
           ++IP  G   SLNV++ATGI L    RQ
Sbjct: 216 VSIPMSGSVSSLNVSVATGICLFEAVRQ 243