Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 53.5 bits (127), Expect = 4e-11
 Identities = 42/151 (27%), Positives = 65/151 (43%), Gaps = 11/151 (7%)

Query: 418 KELGLCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNG 477
           ++ G+ LEF     L      +  D  A V+ NLL NA    +K+  +   +++ L   G
Sbjct: 546 QDYGVSLEFLDAPELTSSEATLDPDRFAQVMANLLSNA----IKHSPAGGCVTVDLRRRG 601

Query: 478 AELVIEVADNGIGISADIAQTLFLKGVSSKNQE-----GHGIGLYLVHQFVTQAHGSILI 532
             L I V D G GI       +F +   + + +     G G+GL +    V Q HG I  
Sbjct: 602 KLLEIGVQDRGPGIPEAFRSRIFERFAQADSSDARQRGGTGLGLAITRSLVQQMHGKIGF 661

Query: 533 DSAEPQGTIFSIFIP--NRPKTLAAENLPAL 561
           D    QGT F + +P    P+ + A   P +
Sbjct: 662 DCQPDQGTRFWLQLPLEEHPQQVQAPAQPLI 692