Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Signal transduction histidine kinase regulating citrate/malate metabolism from Pseudomonas stutzeri RCH2

 Score =  242 bits (618), Expect = 2e-68
 Identities = 172/538 (31%), Positives = 280/538 (52%), Gaps = 31/538 (5%)

Query: 23  VGALLVAMVVIQLSLVAGFFHQTLSETLQDQISTKALIQAREIATDPNLIVLIQQ----N 78
           +  L+  MVV+ L+L    F+  L +TL++  +++    A+ +A   ++ + +      N
Sbjct: 9   ISLLVAVMVVLALALALWLFNVQLQDTLEEGQASRVTNLAQSVAARDDVQLALAGPADFN 68

Query: 79  RLAEVQAKIDRLQRISDANFIVIGDANGIRIAHPDEQKIGLPMQGGDSRRALKEGEYYTS 138
               +Q +ID L++    +FIV+ +   +R+ HP    IG   +G D    L  GE Y S
Sbjct: 69  ADNSLQREIDGLRQRLGVDFIVVMNPRALRLTHPQPTLIGQAFRGDDEGPVLA-GETYAS 127

Query: 139 TQKGSLGWAIRGKAAIVAPSGEILGVVSVGYLLDNISSWLRVYSYPVIFTVLLLMLLSAL 198
              GSLG +IRG A ++   G +LG VSVG  L ++   L+ +   V+  VL LML++AL
Sbjct: 128 RADGSLGRSIRGFAPVLNDEGAVLGAVSVGVTLASLGELLKAHQRGVVLGVLALMLVTAL 187

Query: 199 GAWIFTRHIKQQMFNMEPEEIAMNLNLQQSILQSVYEGIVAISLKGEILSVNAKALNILG 258
           GA +  R+IK+ +  +EP EI   +  +Q++L SV EG++A+  +  I  VN  A  +L 
Sbjct: 188 GAHMLARYIKRVLLGLEPYEITWLVEERQAMLASVREGVLAVDDQARITLVNPAAERLLA 247

Query: 259 IAHQPTHLIGRNVQEFITPTCFFMGASPFGKLAQ--QNRVSQQDELISCNGETLVANRVP 316
                   +GR + E++          P   L +   +   Q+D   S NG  ++ANR P
Sbjct: 248 STGLGKPPLGRPIAEYL----------PNSGLPEVLASATEQRDREFSLNGRAILANRAP 297

Query: 317 INSGQQQIGWVVSFRRRNDFNTLTSQLTQIRQHNDNLRVMSHEFANRLSTIGGLIQIGAY 376
           I    + IG + +FR +++ N L  QLT + ++ + LR  +HEF N+L  + GL Q+G  
Sbjct: 298 IRHQGRVIGAIATFRDKSEVNALAEQLTGVSRYAEALRAATHEFKNKLHVLLGLAQMGDL 357

Query: 377 DEAVKTIRRETAEQQ-----QLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSH 431
           D A++   R+ A+ Q      L++ I +     V+AG LLGK S A+E G+  + D + H
Sbjct: 358 D-ALRAYLRDLADHQLAPATSLVEGIGE----PVLAGFLLGKQSEARERGIDFQVD-VEH 411

Query: 432 LHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGI 491
                       L  +LGNLL+NAFEA  +     + ++L L  + A L + V D+G GI
Sbjct: 412 PLPAAAPEQIHGLVTILGNLLENAFEAVAE--QDERRVNLTLNYDEALLSLHVQDSGGGI 469

Query: 492 SADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIPNR 549
            A +   +F +GVS+K  E  GIGL  V + V    GS+ + S   +G++F + +  R
Sbjct: 470 EATVRGQIFERGVSTKG-ERRGIGLAAVQEQVEAWGGSLAVYSEAGRGSLFEVELSYR 526