Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 691 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score = 57.0 bits (136), Expect = 2e-12
 Identities = 67/240 (27%), Positives = 108/240 (45%), Gaps = 44/240 (18%)

Query: 356 MSHEFANRLSTIGGLIQ----------IGAYDEAVKT----IRRETAEQQQLIDFIA-QT 400
           ++H+F N L+ I G ++          +G  D  V      +RR  +   +L+ F   QT
Sbjct: 319 IAHDFNNLLAGISGSLELITKRLAQGRVGDVDRYVSVAQGAVRRAASLTHRLLAFSRRQT 378

Query: 401 FHPKV--IAGLLLGKYSR-AKELGLCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNAFE 457
             P+V  + GL+       A+ +G  ++   ++H    P  +   +L + L NL  NA +
Sbjct: 379 LSPRVTDVNGLIHDMEELIARTVGPEIDIKVVAHDDLWPALIDHAQLESSLLNLCLNARD 438

Query: 458 ATLKNPHSNKTISLLLTDN---------------GAELVIEVADNGIGISADIAQTLFLK 502
           A    P+  + I  + T N               G  L I V D GIG+S DIA   F  
Sbjct: 439 AM---PNGGRII--IETANASLEECTDPDHGIPAGEHLSIRVTDTGIGMSPDIAAKAFEP 493

Query: 503 GVSSKN-QEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP-----NRPKTLAAE 556
             ++K    G G+GL +V+ FV Q+ G I ++S E QGT   + +P     + P+ +A E
Sbjct: 494 FFTTKAIGAGTGLGLSMVYGFVRQSGGQIRVESVEGQGTSVVMHLPRHTAESAPRPVAPE 553