Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., ATP-binding region, ATPase-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 31/247 (12%)

Query: 326 WVVSFRRRNDFNTLTSQLTQIRQHNDNL------------RVMSHEFANRLSTI-----G 368
           W +S R R   N L  QL  ++Q    L            RV+SHE  N L+ +      
Sbjct: 197 WHLS-RGRFHLNGLEHQLILLKQMTRELNRQEVAVWKKVIRVISHELNNSLAPMRSMVNS 255

Query: 369 GLIQIGAYDEA-----VKTIRRETAEQQQLIDFIAQTFH-PKVI-AGLLLGKYSRAKELG 421
           G +  G  +E        TI + T    Q I+  A+    P+ I A + +G   R  EL 
Sbjct: 256 GRVLAGRLEEPRLNLIFDTIDKRTEHLGQFIEGYARFARLPRPIKAAVDIGALCR--ELQ 313

Query: 422 LCLEFDPLSHLHQEPQCMTSDELAAVLGNLLDNAFEATLKNPHSNKTISLLLTDNGAE-L 480
           L L F+    L  EP      +L  VL NLL NA E+   +   + ++S+    +G   +
Sbjct: 314 LQLAFNIEGGLPAEPVWADEIQLQQVLINLLKNAHESG--SAPGDVSLSVRRQQSGESGV 371

Query: 481 VIEVADNGIGISADIAQTLFLKGVSSKNQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGT 540
           +IEV D G G+S ++     L   S+K Q+G G+GL L  + +    G I + +    G 
Sbjct: 372 LIEVNDRGPGMSPEVLSQALLPFYSTK-QQGTGLGLALCREIIEAHDGRISLQNRSGGGL 430

Query: 541 IFSIFIP 547
              +F+P
Sbjct: 431 QVQLFLP 437