Pairwise Alignments

Query, 565 a.a., sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 450 a.a., sensor protein PhoQ (RefSeq) from Shewanella amazonensis SB2B

 Score = 57.8 bits (138), Expect = 9e-13
 Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 18/160 (11%)

Query: 389 EQQQLIDFIAQTFHPKVIAGLLLGKYSRAKELGLCLEFDPLSHLHQEPQCMTSDELAAVL 448
           EQ QL+  + Q          +L K  R K++       PL     +       +L  + 
Sbjct: 307 EQTQLLPLVNQLSQ-------MLFKIYRDKDVQFSTRILPLLQFPGD-----KGDLMELC 354

Query: 449 GNLLDNAFEATLKNPHSNKTISLLLTDNGAELVIEVADNGIGISADIAQTLFLKGV-SSK 507
           GNL++NAF   +    S   +S  + D G E  + V D+G G++  + Q +  +GV +  
Sbjct: 355 GNLMENAFRLCI----STVRVSAEINDKG-EFELRVEDDGPGVAESLRQKILERGVRADT 409

Query: 508 NQEGHGIGLYLVHQFVTQAHGSILIDSAEPQGTIFSIFIP 547
           +  G GIGL + H+ V   +G++ I+ +  +G +F I IP
Sbjct: 410 HSPGQGIGLAVCHEIVQSYNGTLTIEESNLEGAMFRIRIP 449